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NIES collection MICROBIAL CULTURE COLLECTION General information Search on strains data List of strains Taxonomic index Alphabetical index How to order Cart Japanese HOME Search Strain Data Strain Data Strain Data Strain Data Reference --> Strain number NIES-42 Phylum Cyanophyta Class Cyanophyceae Scientific name Aphanothece elabens (Brébisson ex Meneghini) Elenkin Synonym Former name Microcystis elabens Common name Blue-green alga ; Cyanobacteria Locality (Date of collection) Lake Kasumigaura, Ibaraki, Japan (1974-08-**) Latitude / Longitude 36.0428477398 / 140.373233439 Habitat (Isolation source) Freshwater (Lake water) History Isolator (Date of isolation) Watanabe, Makoto M. (1974-08-**) Identified by Otsuka, Shigeto State of strain Cryopreservation; Unialgal; Clonal; Axenic Culture condition (Preculture condition) Medium: CT Temperature: 25 C Light intensity: 55-70 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 1 M Gene information 16S rRNA ( AB001724 ) Cell size (min - max) Organization Characteristics Cyanobacterial water bloom (aoko) Other strain no. Other collection strain no. : IAM M-177 Remarks Cryopreserved; Axenic Movie Reference Asukabe, H., Akahori, S., Ueno, E., Nakayama, T., Yamashita, R., Arii, S., Harada, K., Imanishi, S. Y. 2020 Cyanobacterial classification with the toxicity using MALDI Biotyper. J. Am. Soc. Mass Spectrom., 31, 1572-1578. Keywords: cyanobacteria; MALDI Biotyper; microcystins; profiling Strain(s): 27, 39, 42, 73, 81, 87, 89, 100, 101, 102, 103, 104, 105, 107, 111, 112, 207, 208, 230, 266, 298, 416, 433, 478, 510, 512, 515, 592, 593, 604, 611, 808, 809, 835, 843, 846, 847, 905, 928, 931, 932, 945, 981, 989, 1025, 1043, 1058, 1061, 1064, 1068, 1069, 1071, 1076, 1085, 1099, 1101, 1105, 1113, 1115, 1126, 1133, 1134, 1135, 1144, 1157, 1215, 1642, 1643, 1652, 1668, 1672, 1673, 1677, 1678, 1698, 2087, 2131, 2412, 2665, 3708, 3733, 3734, 3736, 3755, 3756, 3757 PubMed: 32501712 DOI: 10.1021/jasms.0c00148 Curren, E., Teruaki, Y., Kuwahara, V. S., Leong, S. C. Y. 2019 Rapid profiling of tropical marine cyanobacterial communities. Reg. Stud. Mar. Sci., 25, 100485 (article ID). Keywords: Cyanobacteria; MinION-Oxford Nanopore sequencer; Biodiversity; 16S rRNA amplicon sequencing; Long-read sequencing; Coastal waters; Southeast Asia; Monitoring Strain(s): 22, 25, 42, 843, 2135, 2481 DOI: 10.1016/j.rsma.2018.100485 Pan, H., Song, L., Liu, Y., Börner, T. 2002 Detection of hepatotoxic Microcystis strains by PCR with intact cells from both culture and environmental samples. Arch. Microbiol., 178, 421-427. Keywords: Cyanobacteria; Microcystis; Microcystin; Toxin; Peptide synthetase; Whole-cell PCR Strain(s): 42, 90, 98, 101, 595, 610 PubMed: 12420161 DOI: 10.1007/s00203-002-0464-9 Metcalf, J. S., Bell, S. G., Codd, G. A. 2000 Production of novel polyclonal antibodies against the cyanobacterial toxin microcystin-LR and their application for the detection and quantification of microcystins and nodularin. Water Res., 34, 2761-2769. Keywords: cyanobacteria; blue-green algae; microcystin; toxins; antibodies; immunoassays Strain(s): 42, 102, 103, 104, 595 DOI: 10.1016/S0043-1354(99)00429-7 Ward, C. J., Beattie, K. A., Lee, E. Y. C., Codd, G. A. 1997 Colorimetric protein phosphatase inhibition assay of laboratory strains and natural blooms of cyanobacteria: comparisons with high-performance liquid chromatographic analysis for microcystins. FEMS Mircobiol. Lett., 153, 465-473. Keywords: Microcystin; Protein phosphatase; Cyanobacteria; High-performance liquid chromatography Strain(s): 42, 102, 103, 104, 298, 595 PubMed: 9271876 DOI: 10.1111/j.1574-6968.1997.tb12611.x Unauthorized copying and replication of text, images, and tables in our homepage, are prohibited. PAGE TOP 16-2 Onogawa, Tsukuba, Ibaraki 305-8506, JAPAN TEL +81-29-850-2556 FAX +81-29-850-2587 Send us an e-mail () FAQ Privacy policy ©National Institute for Environmental Studies. All Rights Reserved. Since 1 October 2001
